SMIM27 small integral membrane protein 27
Information
- Symbol
- SMIM27
- Type
- protein-coding
- Description
- small integral membrane protein 27
- Entrez Gene ID
- 100129250
- Genome
- hg19
- Position
- chr9:32,551,142-32,553,005
- Genome
- hg38
- Position
- chr9:32,551,144-32,553,007
- HGNC
- HGNC:31420 HGNC
- Ensembl
- ENSG00000235453 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 4 |
| Likely benign | 0 | 8 |
| Uncertain significance | 0 | 22 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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0 |
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34 |
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0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | C9orf133 |
| SYNONYM | TOPORS-AS1 |
| HGNC | HGNC:31420 HGNC |
| Ensembl | ENSG00000235453 Ensembl |
| AllianceGenome | HGNC:31420 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000451672.2 | hg38 | chr9 | 32,552,329 | 32,568,621 | 16,293 |
| ENST00000453396.5 | hg38 | chr9 | 32,551,144 | 32,553,007 | 1,864 |
| ENST00000644531.1 | hg38 | chr9 | 32,552,345 | 32,553,012 | 668 |
| ENST00000692500.1 | hg38 | chr9 | 32,552,327 | 32,553,007 | 681 |
| ENST00000453396.5 | hg19 | chr9 | 32,551,142 | 32,553,005 | 1,864 |
| ENST00000692500.1 | hg19 | chr9 | 32,552,325 | 32,553,005 | 681 |
| ENST00000451672.2 | hg19 | chr9 | 32,552,327 | 32,568,619 | 16,293 |
| ENST00000644531.1 | hg19 | chr9 | 32,552,343 | 32,553,010 | 668 |
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