SOX1-OT SOX1 overlapping transcript

Information
Symbol
SOX1-OT
Type
ncRNA
Description
SOX1 overlapping transcript
Entrez Gene ID
100505996
Genome
hg19
Position
chr13:112,711,159-112,754,682
Genome
hg38
Position
chr13:112,056,845-112,100,368
HGNC
HGNC:42733 HGNC
Ensembl
ENSG00000224243 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Ranking
ClinVar
0
0
0
0
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM LINC00403
HGNC HGNC:42733 HGNC
Ensembl ENSG00000224243 Ensembl
AllianceGenome HGNC:42733
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000657728.1 hg38 chr13 112,088,047 112,108,014 19,968
ENST00000663025.1 hg38 chr13 112,056,845 112,100,368 43,524
ENST00000663025.1 hg19 chr13 112,711,159 112,754,682 43,524
ENST00000657728.1 hg19 chr13 112,742,361 112,762,328 19,968
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