PELATON plaque enriched lncRNA in atherosclerotic and inflammatory bowel macrophage regulation
Information
- Symbol
- PELATON
- Type
- ncRNA
- Description
- plaque enriched lncRNA in atherosclerotic and inflammatory bowel macrophage regulation
- Entrez Gene ID
- 100506115
- Genome
- hg19
- Position
- chr20:48,892,826-48,899,787
- Genome
- hg38
- Position
- chr20:50,276,289-50,283,250
- HGNC
- HGNC:50328 HGNC
- Ensembl
- ENSG00000224397 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| not provided | 1 | 0 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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0 |
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0 |
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0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
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MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | GCRL1 |
| SYNONYM | LINC01272 |
| SYNONYM | SMIM25 |
| HGNC | HGNC:50328 HGNC |
| Ensembl | ENSG00000224397 Ensembl |
| AllianceGenome | HGNC:50328 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000651976.1 | hg38 | chr20 | 50,247,643 | 50,265,669 | 18,027 |
| ENST00000651466.1 | hg38 | chr20 | 50,259,019 | 50,278,421 | 19,403 |
| ENST00000663009.2 | hg38 | chr20 | 50,276,289 | 50,283,250 | 6,962 |
| ENST00000651976.1 | hg19 | chr20 | 48,864,180 | 48,882,206 | 18,027 |
| ENST00000651466.1 | hg19 | chr20 | 48,875,556 | 48,894,958 | 19,403 |
| ENST00000663009.2 | hg19 | chr20 | 48,892,826 | 48,899,787 | 6,962 |
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