CDKN2A cyclin dependent kinase inhibitor 2A
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 10 | 206 |
| Likely pathogenic | 5 | 126 |
| Benign | 13 | 60 |
| Likely benign | 5 | 626 |
| Conflicting classifications of pathogenicity | 0 | 260 |
| not provided | 495 | 12 |
| other | 2 | 0 |
| Pathogenic; risk factor | 0 | 2 |
| Uncertain significance | 58 | 1,308 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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1,026 |
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1,196 |
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18 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | ARF |
| SYNONYM | CAI2 |
| SYNONYM | CDK4I |
| SYNONYM | CDKN2 |
| SYNONYM | CMM2 |
| SYNONYM | INK4 |
| SYNONYM | INK4A |
| SYNONYM | MLM |
| SYNONYM | MTS-1 |
| SYNONYM | MTS1 |
| SYNONYM | P14 |
| SYNONYM | P14ARF |
| SYNONYM | P16 |
| SYNONYM | P16-INK4A |
| SYNONYM | P16INK4 |
| SYNONYM | P16INK4A |
| SYNONYM | P19 |
| SYNONYM | P19ARF |
| SYNONYM | TP16 |
| MIM | 600160 OMIM |
| HGNC | HGNC:1787 HGNC |
| Ensembl | ENSG00000147889 Ensembl |
| AllianceGenome | HGNC:1787 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000479692.2 | hg38 | chr9 | 21,969,569 | 21,971,346 | 1,778 |
| ENST00000579122.1 | hg38 | chr9 | 21,967,991 | 21,974,858 | 6,868 |
| ENST00000304494.10 | hg38 | chr9 | 21,967,752 | 21,974,857 | 7,106 |
| ENST00000498628.6 | hg38 | chr9 | 21,968,105 | 21,995,301 | 27,197 |
| ENST00000530628.2 | hg38 | chr9 | 21,968,001 | 21,994,411 | 26,411 |
| ENST00000579755.2 | hg38 | chr9 | 21,967,752 | 21,994,392 | 26,641 |
| ENST00000498124.1 | hg38 | chr9 | 21,968,056 | 21,974,866 | 6,811 |
| ENST00000494262.5 | hg38 | chr9 | 21,968,182 | 21,995,269 | 27,088 |
| ENST00000578845.2 | hg38 | chr9 | 21,967,996 | 21,971,332 | 3,337 |
| ENST00000497750.1 | hg38 | chr9 | 21,970,716 | 21,971,400 | 685 |
| ENST00000304494.10 | hg19 | chr9 | 21,967,751 | 21,974,856 | 7,106 |
| ENST00000579755.2 | hg19 | chr9 | 21,967,751 | 21,994,391 | 26,641 |
| ENST00000579122.1 | hg19 | chr9 | 21,967,990 | 21,974,857 | 6,868 |
| ENST00000578845.2 | hg19 | chr9 | 21,967,995 | 21,971,331 | 3,337 |
| ENST00000530628.2 | hg19 | chr9 | 21,968,000 | 21,994,410 | 26,411 |
| ENST00000498124.1 | hg19 | chr9 | 21,968,055 | 21,974,865 | 6,811 |
| ENST00000498628.6 | hg19 | chr9 | 21,968,104 | 21,995,300 | 27,197 |
| ENST00000494262.5 | hg19 | chr9 | 21,968,181 | 21,995,268 | 27,088 |
| ENST00000479692.2 | hg19 | chr9 | 21,969,568 | 21,971,345 | 1,778 |
| ENST00000497750.1 | hg19 | chr9 | 21,970,715 | 21,971,399 | 685 |
| Key | Value |
|---|---|
| strand | - |
| UniProt | TSG |
| start | 21,967,750 |
| Vogelstein | TSG |
| Gene Symbol | CDKN2A |
| Entrez GeneId | 1,029 |
| Chr Band | 9p21 |
| end | 21,994,489 |
| chr | chr9 |
| Name | cyclin-dependent kinase inhibitor 2A (p16(INK4a)) gene |
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