CRTAP cartilage associated protein
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 0 | 92 |
| Likely pathogenic | 0 | 32 |
| Benign | 0 | 104 |
| Likely benign | 0 | 444 |
| Conflicting classifications of pathogenicity | 0 | 30 |
| Uncertain significance | 0 | 552 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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134 |
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1,062 |
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16 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
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MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
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MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | CASP |
| SYNONYM | LEPREL3 |
| SYNONYM | OI7 |
| SYNONYM | P3H5 |
| MIM | 605497 OMIM |
| HGNC | HGNC:2379 HGNC |
| Ensembl | ENSG00000170275 Ensembl |
| AllianceGenome | HGNC:2379 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000320954.11 | hg38 | chr3 | 33,114,014 | 33,147,773 | 33,760 |
| ENST00000449224.1 | hg38 | chr3 | 33,114,054 | 33,143,158 | 29,105 |
| ENST00000320954.11 | hg19 | chr3 | 33,155,506 | 33,189,265 | 33,760 |
| ENST00000449224.1 | hg19 | chr3 | 33,155,546 | 33,184,650 | 29,105 |
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