AGR2 anterior gradient 2, protein disulphide isomerase family member
Information
- Symbol
- AGR2
- Type
- protein-coding
- Description
- anterior gradient 2, protein disulphide isomerase family member
- Entrez Gene ID
- 10551
- Genome
- hg19
- Position
- chr7:16,831,435-16,844,623
- Genome
- hg38
- Position
- chr7:16,791,811-16,804,999
- MIM
- 606358 OMIM
- HGNC
- HGNC:328 HGNC
- Ensembl
- ENSG00000106541 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 0 | 4 |
| Likely pathogenic | 0 | 4 |
| Likely benign | 0 | 2 |
| Conflicting classifications of pathogenicity | 0 | 2 |
| Uncertain significance | 0 | 22 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
28 |
 |
4 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | AG-2 |
| SYNONYM | AG2 |
| SYNONYM | GOB-4 |
| SYNONYM | HAG-2 |
| SYNONYM | HEL-S-116 |
| SYNONYM | HPC8 |
| SYNONYM | PDIA17 |
| SYNONYM | RIFTD |
| SYNONYM | XAG-2 |
| MIM | 606358 OMIM |
| HGNC | HGNC:328 HGNC |
| Ensembl | ENSG00000106541 Ensembl |
| AllianceGenome | HGNC:328 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000419304.7 | hg38 | chr7 | 16,791,811 | 16,804,999 | 13,189 |
| ENST00000401412.5 | hg38 | chr7 | 16,794,674 | 16,804,987 | 10,314 |
| ENST00000419304.7 | hg19 | chr7 | 16,831,435 | 16,844,623 | 13,189 |
| ENST00000401412.5 | hg19 | chr7 | 16,834,298 | 16,844,611 | 10,314 |
| Key | Value |
|---|---|
| strand | - |
| UniProt | OG |
| start | 16,832,263 |
| Gene Symbol | AGR2 |
| Entrez GeneId | 10,551 |
| Chr Band | 7p21.3 |
| end | 16,844,737 |
| chr | chr7 |
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