SLCO1B1 solute carrier organic anion transporter family member 1B1
Information
- Symbol
- SLCO1B1
- Type
- protein-coding
- Description
- solute carrier organic anion transporter family member 1B1
- Entrez Gene ID
- 10599
- Genome
- hg19
- Position
- chr12:21,284,128-21,392,730
- Genome
- hg38
- Position
- chr12:21,131,194-21,239,796
- MIM
- 604843 OMIM
- HGNC
- HGNC:10959 HGNC
- Ensembl
- ENSG00000134538 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 0 | 2 |
| Benign | 0 | 106 |
| Likely benign | 0 | 52 |
| Conflicting classifications of pathogenicity | 0 | 12 |
| drug response | 0 | 2 |
| Likely risk allele | 0 | 2 |
| not provided | 1 | 0 |
| Uncertain significance | 0 | 182 |
Ranking
| ClinVar | |
|---|---|
![]() |
0 |
![]() |
2 |
![]() |
56 |
![]() |
266 |
![]() |
2 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | HBLRR |
| SYNONYM | LST-1 |
| SYNONYM | LST1 |
| SYNONYM | OATP-C |
| SYNONYM | OATP1B1 |
| SYNONYM | OATP2 |
| SYNONYM | OATPC |
| SYNONYM | SLC21A6 |
| MIM | 604843 OMIM |
| HGNC | HGNC:10959 HGNC |
| Ensembl | ENSG00000134538 Ensembl |
| AllianceGenome | HGNC:10959 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000256958.3 | hg38 | chr12 | 21,131,194 | 21,239,796 | 108,603 |
| ENST00000256958.3 | hg19 | chr12 | 21,284,128 | 21,392,730 | 108,603 |
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