CSPG5 chondroitin sulfate proteoglycan 5

Information
Symbol
CSPG5
Type
protein-coding
Description
chondroitin sulfate proteoglycan 5
Entrez Gene ID
10675
Genome
hg19
Position
chr3:47,603,729-47,622,282
Genome
hg38
Position
chr3:47,562,239-47,580,792
MIM
606775 OMIM
HGNC
HGNC:2467 HGNC
Ensembl
ENSG00000114646 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Benign 0 2
Likely benign 0 2
Uncertain significance 0 76
Ranking
ClinVar
0
0
0
80
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM NGC
MIM 606775 OMIM
HGNC HGNC:2467 HGNC
Ensembl ENSG00000114646 Ensembl
AllianceGenome HGNC:2467
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000610462.1 hg38 chr3 47,562,247 47,578,869 16,623
ENST00000383738.6 hg38 chr3 47,562,239 47,580,792 18,554
ENST00000456150.5 hg38 chr3 47,562,239 47,578,133 15,895
ENST00000264723.9 hg38 chr3 47,562,238 47,578,865 16,628
ENST00000264723.9 hg19 chr3 47,603,728 47,620,355 16,628
ENST00000456150.5 hg19 chr3 47,603,729 47,619,623 15,895
ENST00000383738.6 hg19 chr3 47,603,729 47,622,282 18,554
ENST00000610462.1 hg19 chr3 47,603,737 47,620,359 16,623
Genome browser