SLC12A5-AS1 SLC12A5 and MMP9 antisense RNA 1
Information
- Symbol
- SLC12A5-AS1
- Type
- ncRNA
- Description
- SLC12A5 and MMP9 antisense RNA 1
- Entrez Gene ID
- 109729184
- Genome
- hg19
- Position
- chr20:44,642,139-44,650,712
- Genome
- hg38
- Position
- chr20:46,013,500-46,022,073
- HGNC
- HGNC:53143 HGNC
- Ensembl
- ENSG00000204044 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| not provided | 1 | 0 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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0 |
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0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000535913.2 | hg38 | chr20 | 46,013,500 | 46,022,073 | 8,574 |
| ENST00000535913.2 | hg19 | chr20 | 44,642,139 | 44,650,712 | 8,574 |
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