SYNGAP1-AS1 SYNGAP1 antisense RNA 1
Information
- Symbol
- SYNGAP1-AS1
- Type
- ncRNA
- Description
- SYNGAP1 antisense RNA 1
- Entrez Gene ID
- 112390310
- Genome
- hg19
- Position
- chr6:33,405,140-33,422,230
- Genome
- hg38
- Position
- chr6:33,437,363-33,454,453
- HGNC
- HGNC:53831 HGNC
- Ensembl
- ENSG00000274259 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| not provided | 1 | 0 |
Ranking
| ClinVar | |
|---|---|
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Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | SYNGAP1-AS |
| HGNC | HGNC:53831 HGNC |
| Ensembl | ENSG00000274259 Ensembl |
| AllianceGenome | HGNC:53831 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000614205.1 | hg38 | chr6 | 33,453,987 | 33,454,408 | 422 |
| ENST00000630418.1 | hg38 | chr6 | 33,437,363 | 33,454,453 | 17,091 |
| ENST00000630418.1 | hg19 | chr6 | 33,405,140 | 33,422,230 | 17,091 |
| ENST00000614205.1 | hg19 | chr6 | 33,421,764 | 33,422,185 | 422 |
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