SLITRK1 SLIT and NTRK like family member 1

Information
Symbol
SLITRK1
Type
protein-coding
Description
SLIT and NTRK like family member 1
Entrez Gene ID
114798
Genome
hg19
Position
chr13:84,451,340-84,456,528
Genome
hg38
Position
chr13:83,877,205-83,882,393
MIM
609678 OMIM
HGNC
HGNC:20297 HGNC
Ensembl
ENSG00000178235 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Pathogenic 0 4
Benign 14 4
Likely benign 0 22
Conflicting classifications of pathogenicity 0 4
Uncertain significance 0 234
Ranking
ClinVar
0
0
6
252
4
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM LRRC12
SYNONYM TTM
MIM 609678 OMIM
HGNC HGNC:20297 HGNC
Ensembl ENSG00000178235 Ensembl
AllianceGenome HGNC:20297
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000377084.3 hg38 chr13 83,877,205 83,882,393 5,189
ENST00000674365.1 hg38 chr13 83,877,205 83,882,474 5,270
ENST00000377084.3 hg19 chr13 84,451,340 84,456,528 5,189
ENST00000674365.1 hg19 chr13 84,451,340 84,456,609 5,270
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