LRIG3 leucine rich repeats and immunoglobulin like domains 3
Information
- Symbol
- LRIG3
- Type
- protein-coding
- Description
- leucine rich repeats and immunoglobulin like domains 3
- Entrez Gene ID
- 121227
- Genome
- hg19
- Position
- chr12:59,265,937-59,314,285
- Genome
- hg38
- Position
- chr12:58,872,155-58,920,504
- MIM
- 608870 OMIM
- HGNC
- HGNC:30991 HGNC
- Ensembl
- ENSG00000139263 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 2 |
| Likely benign | 0 | 6 |
| Uncertain significance | 0 | 98 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
106 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | LIG3 |
| MIM | 608870 OMIM |
| HGNC | HGNC:30991 HGNC |
| Ensembl | ENSG00000139263 Ensembl |
| AllianceGenome | HGNC:30991 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000320743.8 | hg38 | chr12 | 58,872,155 | 58,920,504 | 48,350 |
| ENST00000379141.8 | hg38 | chr12 | 58,872,149 | 58,919,546 | 47,398 |
| ENST00000379141.8 | hg19 | chr12 | 59,265,931 | 59,313,327 | 47,397 |
| ENST00000320743.8 | hg19 | chr12 | 59,265,937 | 59,314,285 | 48,349 |
| Key | Value |
|---|---|
| strand | - |
| start | 59,265,936 |
| Gene Symbol | LRIG3 |
| Entrez GeneId | 121,227 |
| Chr Band | 12q14.1 |
| end | 59,314,318 |
| chr | chr12 |
| Name | leucine-rich repeats and immunoglobulin-like domains 3 |
Genome browser