SPATA3 spermatogenesis associated 3

Information
Symbol
SPATA3
Type
protein-coding
Description
spermatogenesis associated 3
Entrez Gene ID
130560
Genome
hg19
Position
chr2:231,860,836-231,872,755
Genome
hg38
Position
chr2:230,996,121-231,008,040
MIM
619857 OMIM
HGNC
HGNC:17884 HGNC
Ensembl
ENSG00000173699 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Likely benign 0 8
Uncertain significance 0 30
Ranking
ClinVar
0
0
0
38
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM TSARG1
MIM 619857 OMIM
HGNC HGNC:17884 HGNC
Ensembl ENSG00000173699 Ensembl
AllianceGenome HGNC:17884
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000455816.1 hg38 chr2 230,996,234 231,025,019 28,786
ENST00000645363.1 hg38 chr2 230,990,324 231,002,789 12,466
ENST00000424440.5 hg38 chr2 230,996,121 231,007,284 11,164
ENST00000452881.5 hg38 chr2 230,996,126 231,025,055 28,930
ENST00000433428.7 hg38 chr2 230,996,121 231,008,040 11,920
ENST00000645363.1 hg19 chr2 231,855,039 231,867,504 12,466
ENST00000424440.5 hg19 chr2 231,860,836 231,871,999 11,164
ENST00000433428.7 hg19 chr2 231,860,836 231,872,755 11,920
ENST00000452881.5 hg19 chr2 231,860,841 231,889,770 28,930
ENST00000455816.1 hg19 chr2 231,860,949 231,889,734 28,786
Genome browser