CRAT carnitine O-acetyltransferase
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 32 |
| Likely benign | 0 | 150 |
| Conflicting classifications of pathogenicity | 0 | 8 |
| Uncertain significance | 0 | 290 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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60 |
![]() |
400 |
![]() |
4 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | CAT |
| SYNONYM | CAT1 |
| SYNONYM | NBIA8 |
| MIM | 600184 OMIM |
| HGNC | HGNC:2342 HGNC |
| Ensembl | ENSG00000095321 Ensembl |
| AllianceGenome | HGNC:2342 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000318080.7 | hg38 | chr9 | 129,094,794 | 129,110,793 | 16,000 |
| ENST00000393384.3 | hg38 | chr9 | 129,107,334 | 129,110,711 | 3,378 |
| ENST00000681725.1 | hg38 | chr9 | 129,095,838 | 129,110,791 | 14,954 |
| ENST00000681325.1 | hg38 | chr9 | 129,094,806 | 129,110,791 | 15,986 |
| ENST00000455396.2 | hg38 | chr9 | 129,094,806 | 129,110,681 | 15,876 |
| ENST00000680117.1 | hg38 | chr9 | 129,094,826 | 129,110,791 | 15,966 |
| ENST00000681627.1 | hg38 | chr9 | 129,094,811 | 129,110,737 | 15,927 |
| ENST00000318080.7 | hg19 | chr9 | 131,857,073 | 131,873,072 | 16,000 |
| ENST00000393384.3 | hg19 | chr9 | 131,869,613 | 131,872,990 | 3,378 |
| ENST00000455396.2 | hg19 | chr9 | 131,857,085 | 131,872,960 | 15,876 |
| ENST00000680117.1 | hg19 | chr9 | 131,857,105 | 131,873,070 | 15,966 |
| ENST00000681325.1 | hg19 | chr9 | 131,857,085 | 131,873,070 | 15,986 |
| ENST00000681627.1 | hg19 | chr9 | 131,857,090 | 131,873,016 | 15,927 |
| ENST00000681725.1 | hg19 | chr9 | 131,858,117 | 131,873,070 | 14,954 |
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