CSAG1 chondrosarcoma associated gene 1
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 1 |
| Likely benign | 0 | 2 |
| not provided | 6 | 0 |
| Uncertain significance | 0 | 12 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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0 |
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15 |
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0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
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MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
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MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | CSAGE |
| SYNONYM | CT24.1 |
| MIM | 300944 OMIM |
| HGNC | HGNC:24294 HGNC |
| Ensembl | ENSG00000198930 Ensembl |
| AllianceGenome | HGNC:24294 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000370291.6 | hg38 | chrX | 152,727,484 | 152,733,691 | 6,208 |
| ENST00000452779.3 | hg38 | chrX | 152,727,484 | 152,733,721 | 6,238 |
| ENST00000370287.7 | hg38 | chrX | 152,727,484 | 152,733,735 | 6,252 |
| ENST00000370287.7 | hg19 | chrX | 151,903,228 | 151,909,518 | 6,291 |
| ENST00000370291.6 | hg19 | chrX | 151,903,272 | 151,909,518 | 6,247 |
| ENST00000452779.3 | hg19 | chrX | 151,903,242 | 151,909,518 | 6,277 |
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