RMST rhabdomyosarcoma 2 associated transcript
Information
Clinical Significance
| MGeND | ClinVar |
|---|
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
0 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | LINC00054 |
| SYNONYM | NCRMS |
| SYNONYM | NCRNA00054 |
| MIM | 607045 OMIM |
| HGNC | HGNC:29893 HGNC |
| Ensembl | ENSG00000255794 Ensembl |
| AllianceGenome | HGNC:29893 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000666798.1 | hg38 | chr12 | 97,465,721 | 97,533,767 | 68,047 |
| ENST00000640149.1 | hg38 | chr12 | 97,430,884 | 97,565,035 | 134,152 |
| ENST00000639121.1 | hg38 | chr12 | 97,464,818 | 97,598,415 | 133,598 |
| ENST00000667306.1 | hg38 | chr12 | 97,431,884 | 97,532,841 | 100,958 |
| ENST00000690227.1 | hg38 | chr12 | 97,465,102 | 97,565,033 | 99,932 |
| ENST00000664685.1 | hg38 | chr12 | 97,463,431 | 97,565,034 | 101,604 |
| ENST00000538559.6 | hg38 | chr12 | 97,431,653 | 97,565,015 | 133,363 |
| ENST00000658877.1 | hg38 | chr12 | 97,463,201 | 97,564,971 | 101,771 |
| ENST00000665975.1 | hg38 | chr12 | 97,462,007 | 97,565,032 | 103,026 |
| ENST00000640149.1 | hg19 | chr12 | 97,824,662 | 97,958,813 | 134,152 |
| ENST00000538559.6 | hg19 | chr12 | 97,825,431 | 97,958,793 | 133,363 |
| ENST00000639121.1 | hg19 | chr12 | 97,858,596 | 97,992,193 | 133,598 |
| ENST00000665975.1 | hg19 | chr12 | 97,855,785 | 97,958,810 | 103,026 |
| ENST00000667306.1 | hg19 | chr12 | 97,825,662 | 97,926,619 | 100,958 |
| ENST00000658877.1 | hg19 | chr12 | 97,856,979 | 97,958,749 | 101,771 |
| ENST00000664685.1 | hg19 | chr12 | 97,857,209 | 97,958,812 | 101,604 |
| ENST00000666798.1 | hg19 | chr12 | 97,859,499 | 97,927,545 | 68,047 |
| ENST00000690227.1 | hg19 | chr12 | 97,858,880 | 97,958,811 | 99,932 |
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