EMD emerin
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 12 | 144 |
| Likely pathogenic | 0 | 42 |
| Benign | 0 | 48 |
| Likely benign | 0 | 426 |
| Conflicting classifications of pathogenicity | 0 | 88 |
| not provided | 8 | 0 |
| Uncertain significance | 0 | 322 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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244 |
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682 |
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16 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | EDMD |
| SYNONYM | LEMD5 |
| SYNONYM | STA |
| MIM | 300384 OMIM |
| HGNC | HGNC:3331 HGNC |
| Ensembl | ENSG00000102119 Ensembl |
| AllianceGenome | HGNC:3331 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000682114.1 | hg38 | chrX | 154,379,417 | 154,381,523 | 2,107 |
| ENST00000683627.1 | hg38 | chrX | 154,379,485 | 154,381,520 | 2,036 |
| ENST00000369835.3 | hg38 | chrX | 154,379,273 | 154,381,291 | 2,019 |
| ENST00000369842.9 | hg38 | chrX | 154,379,295 | 154,381,523 | 2,229 |
| ENST00000369835.3 | hg19 | chrX | 153,607,633 | 153,609,651 | 2,019 |
| ENST00000369842.9 | hg19 | chrX | 153,607,655 | 153,609,883 | 2,229 |
| ENST00000682114.1 | hg19 | chrX | 153,607,777 | 153,609,883 | 2,107 |
| ENST00000683627.1 | hg19 | chrX | 153,607,845 | 153,609,880 | 2,036 |
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