ETV6 ETS variant transcription factor 6
Information
Clinical Significance
MGeND | ClinVar | |
---|---|---|
Pathogenic | 3 | 22 |
Likely pathogenic | 0 | 40 |
Benign | 0 | 106 |
Likely benign | 0 | 232 |
Conflicting classifications of pathogenicity | 0 | 16 |
not provided | 71 | 0 |
Uncertain significance | 0 | 282 |
Ranking
ClinVar | |
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0 |
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0 |
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110 |
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530 |
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14 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
Target data | : |
MGeND data only
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Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
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MGeND data only
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Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Type | ID |
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SYNONYM | TEL |
SYNONYM | TEL/ABL |
SYNONYM | THC5 |
MIM | 600618 OMIM |
HGNC | HGNC:3495 HGNC |
Ensembl | ENSG00000139083 Ensembl |
AllianceGenome | HGNC:3495 |
Descrption | Source | Links |
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ID | Genome | Chromosome | Start | End | Length |
---|---|---|---|---|---|
ENST00000396373.9 | hg38 | chr12 | 11,649,674 | 11,895,377 | 245,704 |
ENST00000396373.9 | hg19 | chr12 | 11,802,608 | 12,048,311 | 245,704 |
Key | Value |
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strand | + |
UniProt | OG |
start | 11,802,787 |
Gene Symbol | ETV6 |
Entrez GeneId | 2,120 |
Chr Band | 12p13 |
end | 12,048,324 |
chr | chr12 |
Name | ets variant gene 6 (TEL oncogene) |
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