FANCE FA complementation group E
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 0 | 76 |
| Likely pathogenic | 0 | 82 |
| Benign | 0 | 56 |
| Likely benign | 0 | 562 |
| Conflicting classifications of pathogenicity | 0 | 62 |
| not provided | 0 | 4 |
| Uncertain significance | 9 | 586 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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266 |
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1,028 |
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20 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
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MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | FACE |
| SYNONYM | FAE |
| MIM | 613976 OMIM |
| HGNC | HGNC:3586 HGNC |
| Ensembl | ENSG00000112039 Ensembl |
| AllianceGenome | HGNC:3586 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000229769.3 | hg38 | chr6 | 35,452,338 | 35,467,102 | 14,765 |
| ENST00000696264.1 | hg38 | chr6 | 35,452,546 | 35,467,064 | 14,519 |
| ENST00000229769.3 | hg19 | chr6 | 35,420,115 | 35,434,879 | 14,765 |
| ENST00000696264.1 | hg19 | chr6 | 35,420,323 | 35,434,841 | 14,519 |
| Key | Value |
|---|---|
| strand | + |
| start | 35,420,137 |
| Gene Symbol | FANCE |
| Entrez GeneId | 2,178 |
| Chr Band | 6p21-p22 |
| end | 35,434,880 |
| chr | chr6 |
| Name | Fanconi anemia, complementation group E |
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