OBSL1 obscurin like cytoskeletal adaptor 1
Information
- Symbol
- OBSL1
- Type
- protein-coding
- Description
- obscurin like cytoskeletal adaptor 1
- Entrez Gene ID
- 23363
- Genome
- hg19
- Position
- chr2:220,415,450-220,436,261
- Genome
- hg38
- Position
- chr2:219,550,728-219,571,539
- MIM
- 610991 OMIM
- HGNC
- HGNC:29092 HGNC
- Ensembl
- ENSG00000124006 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
MGeND | ClinVar | |
---|---|---|
Pathogenic | 0 | 52 |
Likely pathogenic | 0 | 44 |
Benign | 0 | 238 |
Likely benign | 0 | 558 |
Conflicting classifications of pathogenicity | 0 | 148 |
no classification for the single variant | 0 | 2 |
not provided | 1 | 0 |
Uncertain significance | 0 | 1,128 |
Ranking
ClinVar | |
---|---|
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0 |
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0 |
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440 |
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1,518 |
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18 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
Target data | : |
MGeND data only
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Category | : |
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Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Type | ID |
---|---|
MIM | 610991 OMIM |
HGNC | HGNC:29092 HGNC |
Ensembl | ENSG00000124006 Ensembl |
AllianceGenome | HGNC:29092 |
Descrption | Source | Links |
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ID | Genome | Chromosome | Start | End | Length |
---|---|---|---|---|---|
ENST00000404537.6 | hg38 | chr2 | 219,550,728 | 219,571,539 | 20,812 |
ENST00000373873.8 | hg38 | chr2 | 219,561,722 | 219,571,289 | 9,568 |
ENST00000373876.5 | hg38 | chr2 | 219,550,756 | 219,571,241 | 20,486 |
ENST00000603926.5 | hg38 | chr2 | 219,555,166 | 219,571,289 | 16,124 |
ENST00000289656.3 | hg38 | chr2 | 219,561,747 | 219,571,464 | 9,718 |
ENST00000404537.6 | hg19 | chr2 | 220,415,450 | 220,436,261 | 20,812 |
ENST00000373876.5 | hg19 | chr2 | 220,415,478 | 220,435,963 | 20,486 |
ENST00000603926.5 | hg19 | chr2 | 220,419,888 | 220,436,011 | 16,124 |
ENST00000373873.8 | hg19 | chr2 | 220,426,444 | 220,436,011 | 9,568 |
ENST00000289656.3 | hg19 | chr2 | 220,426,469 | 220,436,186 | 9,718 |
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