CHMP2B charged multivesicular body protein 2B
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 0 | 8 |
| Likely pathogenic | 0 | 2 |
| Benign | 6 | 54 |
| Likely benign | 0 | 80 |
| Conflicting classifications of pathogenicity | 0 | 18 |
| not provided | 0 | 2 |
| Uncertain significance | 0 | 152 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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46 |
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218 |
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10 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | ALS17 |
| SYNONYM | CHMP2.5 |
| SYNONYM | DMT1 |
| SYNONYM | FTDALS7 |
| SYNONYM | VPS2-2 |
| SYNONYM | VPS2B |
| MIM | 609512 OMIM |
| HGNC | HGNC:24537 HGNC |
| Ensembl | ENSG00000083937 Ensembl |
| AllianceGenome | HGNC:24537 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000263780.9 | hg38 | chr3 | 87,227,309 | 87,255,556 | 28,248 |
| ENST00000471660.5 | hg38 | chr3 | 87,227,271 | 87,255,548 | 28,278 |
| ENST00000676705.1 | hg38 | chr3 | 87,227,312 | 87,255,486 | 28,175 |
| ENST00000494980.5 | hg38 | chr3 | 87,227,302 | 87,254,224 | 26,923 |
| ENST00000472024.3 | hg38 | chr3 | 87,227,309 | 87,255,486 | 28,178 |
| ENST00000471660.5 | hg19 | chr3 | 87,276,421 | 87,304,698 | 28,278 |
| ENST00000494980.5 | hg19 | chr3 | 87,276,452 | 87,303,374 | 26,923 |
| ENST00000472024.3 | hg19 | chr3 | 87,276,459 | 87,304,636 | 28,178 |
| ENST00000263780.9 | hg19 | chr3 | 87,276,459 | 87,304,706 | 28,248 |
| ENST00000676705.1 | hg19 | chr3 | 87,276,462 | 87,304,636 | 28,175 |
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