GYPC glycophorin C (Gerbich blood group)

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Information
Clinical Significance
Ranking
Frequency
Disease area statistics
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Information

Symbol: GYPC
Type: protein-coding
Description: glycophorin C (Gerbich blood group)
Entrez Gene ID: 2995
Genome: hg19
Position: chr2:127,413,734-127,454,243
Genome: hg38
Position: chr2:126,656,158-126,696,667
MIM: 110750 OMIM
HGNC: HGNC:4704 HGNC
Ensembl: ENSG00000136732 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Benign	0	20
Likely benign	0	4
Affects	0	6
Pathogenic; protective	0	2
Uncertain significance	0	48

Ranking

	ClinVar
	0
	0
	10
	62
	8

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

[No Data.]

Locus Zoom

Variants

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Target data	:	MGeND data only
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Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

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Target data	:	MGeND data only
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Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

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Target data	:	MGeND data only
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Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	CD236
SYNONYM	CD236R
SYNONYM	GE
SYNONYM	GPC
SYNONYM	GPD
SYNONYM	GYPD
SYNONYM	PAS-2
SYNONYM	PAS-2'
MIM	110750 OMIM
HGNC	HGNC:4704 HGNC
Ensembl	ENSG00000136732 Ensembl
AllianceGenome	HGNC:4704

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000409836.3	hg38	chr2	126,656,184	126,696,664	40,481
ENST00000356887.12	hg38	chr2	126,656,189	126,696,667	40,479
ENST00000259254.9	hg38	chr2	126,656,158	126,696,667	40,510
ENST00000259254.9	hg19	chr2	127,413,734	127,454,243	40,510
ENST00000409836.3	hg19	chr2	127,413,760	127,454,240	40,481
ENST00000356887.12	hg19	chr2	127,413,765	127,454,243	40,479

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