PRICKLE4 prickle planar cell polarity protein 4
Information
- Symbol
- PRICKLE4
- Type
- protein-coding
- Description
- prickle planar cell polarity protein 4
- Entrez Gene ID
- 29964
- Genome
- hg19
- Position
- chr6:41,748,520-41,755,190
- Genome
- hg38
- Position
- chr6:41,780,782-41,787,452
- MIM
- 611389 OMIM
- HGNC
- HGNC:16805 HGNC
- Ensembl
- ENSG00000278224 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Likely benign | 0 | 4 |
| Uncertain significance | 0 | 38 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
42 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | C6orf49 |
| SYNONYM | OBTP |
| SYNONYM | OEBT |
| SYNONYM | TOMM6 |
| MIM | 611389 OMIM |
| HGNC | HGNC:16805 HGNC |
| Ensembl | ENSG00000278224 Ensembl |
| AllianceGenome | HGNC:16805 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000394259.5 | hg38 | chr6 | 41,784,119 | 41,786,711 | 2,593 |
| ENST00000359201.6 | hg38 | chr6 | 41,781,358 | 41,787,372 | 6,015 |
| ENST00000394260.2 | hg38 | chr6 | 41,784,119 | 41,787,129 | 3,011 |
| ENST00000458694.6 | hg38 | chr6 | 41,780,782 | 41,787,452 | 6,671 |
| ENST00000458694.6 | hg19 | chr6 | 41,748,520 | 41,755,190 | 6,671 |
| ENST00000359201.6 | hg19 | chr6 | 41,749,096 | 41,755,110 | 6,015 |
| ENST00000394259.5 | hg19 | chr6 | 41,751,857 | 41,754,449 | 2,593 |
| ENST00000394260.2 | hg19 | chr6 | 41,751,857 | 41,754,867 | 3,011 |
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