SPANXA1 sperm protein associated with the nucleus, X-linked, family member A1
Information
- Symbol
- SPANXA1
- Type
- protein-coding
- Description
- sperm protein associated with the nucleus, X-linked, family member A1
- Entrez Gene ID
- 30014
- Genome
- hg19
- Position
- chrX:140,671,796-140,672,860
- Genome
- hg38
- Position
- chrX:141,583,674-141,584,738
- MIM
- 300305 OMIM
- HGNC
- HGNC:11218 HGNC
- Ensembl
- ENSG00000198021 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| not provided | 6 | 0 |
Ranking
| ClinVar | |
|---|---|
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Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | CT11.1 |
| SYNONYM | CT11.3 |
| SYNONYM | NAP-X |
| SYNONYM | SPAN-X |
| SYNONYM | SPAN-Xa |
| SYNONYM | SPAN-Xb |
| SYNONYM | SPANX |
| SYNONYM | SPANX-A |
| MIM | 300305 OMIM |
| HGNC | HGNC:11218 HGNC |
| Ensembl | ENSG00000198021 Ensembl |
| AllianceGenome | HGNC:11218 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000370519.4 | hg38 | chrX | 141,583,674 | 141,584,738 | 1,065 |
| ENST00000370519.4 | hg19 | chrX | 140,671,796 | 140,672,860 | 1,065 |
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