HOXA1 homeobox A1

Information
Symbol
HOXA1
Type
protein-coding
Description
homeobox A1
Entrez Gene ID
3198
Genome
hg19
Position
chr7:27,132,612-27,135,619
Genome
hg38
Position
chr7:27,092,993-27,096,000
MIM
142955 OMIM
HGNC
HGNC:5099 HGNC
Ensembl
ENSG00000105991 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Pathogenic 0 8
Likely pathogenic 0 2
Benign 0 16
Likely benign 0 36
Conflicting classifications of pathogenicity 0 14
not provided 0 2
Uncertain significance 0 124
Ranking
ClinVar
0
0
18
154
6
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM BSAS
SYNONYM HOX1
SYNONYM HOX1F
MIM 142955 OMIM
HGNC HGNC:5099 HGNC
Ensembl ENSG00000105991 Ensembl
AllianceGenome HGNC:5099
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000355633.5 hg38 chr7 27,093,313 27,095,996 2,684
ENST00000643460.2 hg38 chr7 27,092,993 27,096,000 3,008
ENST00000643460.2 hg19 chr7 27,132,612 27,135,619 3,008
ENST00000355633.5 hg19 chr7 27,132,932 27,135,615 2,684
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