HOXA11 homeobox A11

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Information
Clinical Significance
Ranking
Frequency
Disease area statistics
Locus Zoom
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Information

Symbol: HOXA11
Type: protein-coding
Description: homeobox A11
Entrez Gene ID: 3207
Genome: hg19
Position: chr7:27,220,776-27,224,851
Genome: hg38
Position: chr7:27,181,157-27,185,232
MIM: 142958 OMIM
HGNC: HGNC:5101 HGNC
Ensembl: ENSG00000005073 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Pathogenic	0	2
Likely pathogenic	0	4
Benign	6	10
Likely benign	0	16
Conflicting classifications of pathogenicity	0	2
Uncertain significance	0	68

Ranking

	ClinVar
	0
	0
	4
	84
	10

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

Locus Zoom

Variants

Search Word

Target data	:	MGeND data only
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Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

Search Word

Target data	:	MGeND data only
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Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Search Word

Target data	:	MGeND data only
Category	:
Search word	:
Filtering	:

Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	HOX1
SYNONYM	HOX1I
SYNONYM	RUSAT1
MIM	142958 OMIM
HGNC	HGNC:5101 HGNC
Ensembl	ENSG00000005073 Ensembl
AllianceGenome	HGNC:5101

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000006015.4	hg38	chr7	27,181,157	27,185,232	4,076
ENST00000006015.4	hg19	chr7	27,220,776	27,224,851	4,076

Key	Value
strand	-
start	27,220,775
Gene Symbol	HOXA11
Entrez GeneId	3,207
Chr Band	7p15-p14.2
end	27,224,834
chr	chr7
Name	homeo box A11

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