HOXC11 homeobox C11
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Likely benign | 0 | 4 |
| Uncertain significance | 0 | 38 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
42 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
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MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
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MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | HOX3H |
| MIM | 605559 OMIM |
| HGNC | HGNC:5123 HGNC |
| Ensembl | ENSG00000123388 Ensembl |
| AllianceGenome | HGNC:5123 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000546378.1 | hg38 | chr12 | 53,973,126 | 53,977,643 | 4,518 |
| ENST00000243082.4 | hg38 | chr12 | 53,973,128 | 53,976,419 | 3,292 |
| ENST00000546378.1 | hg19 | chr12 | 54,366,910 | 54,371,427 | 4,518 |
| ENST00000243082.4 | hg19 | chr12 | 54,366,912 | 54,370,203 | 3,292 |
| Key | Value |
|---|---|
| strand | + |
| start | 54,366,909 |
| Gene Symbol | HOXC11 |
| Entrez GeneId | 3,227 |
| Chr Band | 12q13.3 |
| end | 54,370,202 |
| chr | chr12 |
| Name | homeo box C11 |
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