HOXC13 homeobox C13

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Information
Clinical Significance
Ranking
Frequency
Disease area statistics
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Information

Symbol: HOXC13
Type: protein-coding
Description: homeobox C13
Entrez Gene ID: 3229
Genome: hg19
Position: chr12:54,332,615-54,340,328
Genome: hg38
Position: chr12:53,938,831-53,946,544
MIM: 142976 OMIM
HGNC: HGNC:5125 HGNC
Ensembl: ENSG00000123364 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Pathogenic	0	8
Benign	0	6
Likely benign	0	10
Uncertain significance	2	76

Ranking

	ClinVar
	0
	0
	0
	96
	4

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

Locus Zoom

Variants

Search Word

Target data	:	MGeND data only
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Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

Search Word

Target data	:	MGeND data only
Category	:
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Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Search Word

Target data	:	MGeND data only
Category	:
Search word	:
Filtering	:

Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	ECTD9
SYNONYM	HOX3
SYNONYM	HOX3G
MIM	142976 OMIM
HGNC	HGNC:5125 HGNC
Ensembl	ENSG00000123364 Ensembl
AllianceGenome	HGNC:5125

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000243056.5	hg38	chr12	53,938,831	53,946,544	7,714
ENST00000243056.5	hg19	chr12	54,332,615	54,340,328	7,714

Key	Value
strand	+
start	54,332,575
Gene Symbol	HOXC13
Entrez GeneId	3,229
Chr Band	12q13.3
end	54,340,327
chr	chr12
Name	homeo box C13

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