APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1
Information
- Symbol
- APEX1
- Type
- protein-coding
- Description
- apurinic/apyrimidinic endodeoxyribonuclease 1
- Entrez Gene ID
- 328
- Genome
- hg19
- Position
- chr14:20,923,385-20,925,926
- Genome
- hg38
- Position
- chr14:20,455,226-20,457,767
- MIM
- 107748 OMIM
- HGNC
- HGNC:587 HGNC
- Ensembl
- ENSG00000100823 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 12 |
| Likely benign | 0 | 14 |
| not provided | 49 | 4 |
| Uncertain significance | 0 | 16 |
Ranking
| ClinVar | |
|---|---|
![]() |
0 |
![]() |
0 |
![]() |
10 |
![]() |
30 |
![]() |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | APE |
| SYNONYM | APE1 |
| SYNONYM | APEN |
| SYNONYM | APEX |
| SYNONYM | APX |
| SYNONYM | HAP1 |
| SYNONYM | REF1 |
| MIM | 107748 OMIM |
| HGNC | HGNC:587 HGNC |
| Ensembl | ENSG00000100823 Ensembl |
| AllianceGenome | HGNC:587 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000557054.1 | hg38 | chr14 | 20,455,247 | 20,457,767 | 2,521 |
| ENST00000216714.8 | hg38 | chr14 | 20,455,226 | 20,457,767 | 2,542 |
| ENST00000555414.5 | hg38 | chr14 | 20,455,191 | 20,457,772 | 2,582 |
| ENST00000398030.8 | hg38 | chr14 | 20,455,226 | 20,457,767 | 2,542 |
| ENST00000398030.8 | hg19 | chr14 | 20,923,385 | 20,925,926 | 2,542 |
| ENST00000216714.8 | hg19 | chr14 | 20,923,385 | 20,925,926 | 2,542 |
| ENST00000555414.5 | hg19 | chr14 | 20,923,350 | 20,925,931 | 2,582 |
| ENST00000557054.1 | hg19 | chr14 | 20,923,406 | 20,925,926 | 2,521 |
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