LRRTM1 leucine rich repeat transmembrane neuronal 1

Information
Symbol
LRRTM1
Type
protein-coding
Description
leucine rich repeat transmembrane neuronal 1
Entrez Gene ID
347730
Genome
hg19
Position
chr2:80,529,003-80,531,877
Genome
hg38
Position
chr2:80,301,878-80,304,752
MIM
610867 OMIM
HGNC
HGNC:19408 HGNC
Ensembl
ENSG00000162951 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Benign 0 2
Likely benign 0 4
Uncertain significance 0 56
Ranking
ClinVar
0
0
0
62
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
MIM 610867 OMIM
HGNC HGNC:19408 HGNC
Ensembl ENSG00000162951 Ensembl
AllianceGenome HGNC:19408
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000409148.1 hg38 chr2 80,301,880 80,304,274 2,395
ENST00000295057.4 hg38 chr2 80,301,878 80,304,752 2,875
ENST00000295057.4 hg19 chr2 80,529,003 80,531,877 2,875
ENST00000409148.1 hg19 chr2 80,529,005 80,531,399 2,395
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