LCN2 lipocalin 2

Information
Symbol
LCN2
Type
protein-coding
Description
lipocalin 2
Entrez Gene ID
3934
Genome
hg19
Position
chr9:130,911,350-130,915,412
Genome
hg38
Position
chr9:128,149,071-128,153,133
MIM
600181 OMIM
HGNC
HGNC:6526 HGNC
Ensembl
ENSG00000148346 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Benign 0 8
Likely benign 0 6
Uncertain significance 0 26
Ranking
ClinVar
0
0
0
40
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM 24p3
SYNONYM MSFI
SYNONYM NGAL
SYNONYM p25
MIM 600181 OMIM
HGNC HGNC:6526 HGNC
Ensembl ENSG00000148346 Ensembl
AllianceGenome HGNC:6526
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000277480.7 hg38 chr9 128,149,453 128,153,453 4,001
ENST00000372998.1 hg38 chr9 128,149,518 128,153,139 3,622
ENST00000373017.5 hg38 chr9 128,149,071 128,153,133 4,063
ENST00000373017.5 hg19 chr9 130,911,350 130,915,412 4,063
ENST00000277480.7 hg19 chr9 130,911,732 130,915,732 4,001
ENST00000372998.1 hg19 chr9 130,911,797 130,915,418 3,622
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