PATE2 prostate and testis expressed 2
Information
- Symbol
- PATE2
- Type
- protein-coding
- Description
- prostate and testis expressed 2
- Entrez Gene ID
- 399967
- Genome
- hg19
- Position
- chr11:125,646,008-125,648,723
- Genome
- hg38
- Position
- chr11:125,776,113-125,778,828
- HGNC
- HGNC:32249 HGNC
- Ensembl
- ENSG00000196844 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Uncertain significance | 0 | 18 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
18 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
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MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | C11orf38 |
| SYNONYM | PATE-M |
| SYNONYM | UNQ3112 |
| HGNC | HGNC:32249 HGNC |
| Ensembl | ENSG00000196844 Ensembl |
| AllianceGenome | HGNC:32249 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000358524.8 | hg38 | chr11 | 125,776,113 | 125,778,828 | 2,716 |
| ENST00000436890.2 | hg38 | chr11 | 125,776,894 | 125,778,810 | 1,917 |
| ENST00000358524.8 | hg19 | chr11 | 125,646,008 | 125,648,723 | 2,716 |
| ENST00000436890.2 | hg19 | chr11 | 125,646,789 | 125,648,705 | 1,917 |
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