BMAL1 basic helix-loop-helix ARNT like 1
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 4 |
| Likely benign | 0 | 6 |
| Uncertain significance | 0 | 34 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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0 |
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44 |
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0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | ARNTL |
| SYNONYM | ARNTL1 |
| SYNONYM | BMAL1c |
| SYNONYM | JAP3 |
| SYNONYM | MOP3 |
| SYNONYM | PASD3 |
| SYNONYM | TIC |
| SYNONYM | bHLHe5 |
| MIM | 602550 OMIM |
| HGNC | HGNC:701 HGNC |
| Ensembl | ENSG00000133794 Ensembl |
| AllianceGenome | HGNC:701 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000673817.1 | hg38 | chr11 | 13,277,830 | 13,387,262 | 109,433 |
| ENST00000403510.8 | hg38 | chr11 | 13,277,790 | 13,387,262 | 109,473 |
| ENST00000389707.8 | hg38 | chr11 | 13,277,798 | 13,387,266 | 109,469 |
| ENST00000401424.6 | hg38 | chr11 | 13,277,778 | 13,387,261 | 109,484 |
| ENST00000403290.6 | hg38 | chr11 | 13,277,790 | 13,387,266 | 109,477 |
| ENST00000403482.7 | hg38 | chr11 | 13,356,878 | 13,387,266 | 30,389 |
| ENST00000403482.7 | hg19 | chr11 | 13,378,425 | 13,408,813 | 30,389 |
| ENST00000673817.1 | hg19 | chr11 | 13,299,377 | 13,408,809 | 109,433 |
| ENST00000389707.8 | hg19 | chr11 | 13,299,345 | 13,408,813 | 109,469 |
| ENST00000401424.6 | hg19 | chr11 | 13,299,325 | 13,408,808 | 109,484 |
| ENST00000403290.6 | hg19 | chr11 | 13,299,337 | 13,408,813 | 109,477 |
| ENST00000403510.8 | hg19 | chr11 | 13,299,337 | 13,408,809 | 109,473 |
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