LYZ lysozyme
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 0 | 10 |
| Benign | 0 | 34 |
| Likely benign | 0 | 14 |
| Conflicting classifications of pathogenicity | 0 | 2 |
| Uncertain significance | 0 | 72 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
16 |
 |
106 |
 |
6 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
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MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
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MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | AMYLD5 |
| SYNONYM | LYZF1 |
| SYNONYM | LZM |
| MIM | 153450 OMIM |
| HGNC | HGNC:6740 HGNC |
| Ensembl | ENSG00000090382 Ensembl |
| AllianceGenome | HGNC:6740 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000548839.1 | hg38 | chr12 | 69,348,386 | 69,350,506 | 2,121 |
| ENST00000261267.7 | hg38 | chr12 | 69,348,381 | 69,354,234 | 5,854 |
| ENST00000549690.1 | hg38 | chr12 | 69,348,384 | 69,353,495 | 5,112 |
| ENST00000261267.7 | hg19 | chr12 | 69,742,161 | 69,748,014 | 5,854 |
| ENST00000549690.1 | hg19 | chr12 | 69,742,164 | 69,747,275 | 5,112 |
| ENST00000548839.1 | hg19 | chr12 | 69,742,166 | 69,744,286 | 2,121 |
| Key | Value |
|---|---|
| strand | + |
| start | 69,742,133 |
| Gene Symbol | LYZ |
| Entrez GeneId | 4,069 |
| Chr Band | 12q15 |
| end | 69,748,012 |
| chr | chr12 |
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