MMP13 matrix metallopeptidase 13
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 0 | 30 |
| Likely pathogenic | 0 | 28 |
| Benign | 12 | 70 |
| Likely benign | 0 | 150 |
| Conflicting classifications of pathogenicity | 0 | 42 |
| Uncertain significance | 0 | 268 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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68 |
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444 |
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6 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | CLG3 |
| SYNONYM | MANDP1 |
| SYNONYM | MDST |
| SYNONYM | MMP-13 |
| MIM | 600108 OMIM |
| HGNC | HGNC:7159 HGNC |
| Ensembl | ENSG00000137745 Ensembl |
| AllianceGenome | HGNC:7159 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000340273.4 | hg38 | chr11 | 102,944,330 | 102,955,705 | 11,376 |
| ENST00000260302.8 | hg38 | chr11 | 102,942,995 | 102,955,732 | 12,738 |
| ENST00000260302.8 | hg19 | chr11 | 102,813,724 | 102,826,461 | 12,738 |
| ENST00000340273.4 | hg19 | chr11 | 102,815,059 | 102,826,434 | 11,376 |
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