NPHS1 NPHS1 adhesion molecule, nephrin
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 35 | 380 |
| Likely pathogenic | 2 | 514 |
| Benign | 0 | 133 |
| Likely benign | 0 | 1,910 |
| Conflicting classifications of pathogenicity | 0 | 242 |
| drug response | 0 | 6 |
| no classification for the single variant | 0 | 4 |
| Uncertain significance | 0 | 494 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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490 |
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2,659 |
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136 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
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MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
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MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | CNF |
| SYNONYM | NPHN |
| SYNONYM | nephrin |
| MIM | 602716 OMIM |
| HGNC | HGNC:7908 HGNC |
| Ensembl | ENSG00000161270 Ensembl |
| AllianceGenome | HGNC:7908 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000378910.10 | hg38 | chr19 | 35,825,372 | 35,852,504 | 27,133 |
| ENST00000353632.6 | hg38 | chr19 | 35,826,380 | 35,851,838 | 25,459 |
| ENST00000378910.10 | hg19 | chr19 | 36,316,274 | 36,343,406 | 27,133 |
| ENST00000353632.6 | hg19 | chr19 | 36,317,282 | 36,342,740 | 25,459 |
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