PBDC1 polysaccharide biosynthesis domain containing 1
Information
- Symbol
- PBDC1
- Type
- protein-coding
- Description
- polysaccharide biosynthesis domain containing 1
- Entrez Gene ID
- 51260
- Genome
- hg19
- Position
- chrX:75,392,897-75,398,149
- Genome
- hg38
- Position
- chrX:76,173,062-76,178,314
- HGNC
- HGNC:28790 HGNC
- Ensembl
- ENSG00000102390 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Likely benign | 0 | 4 |
| not provided | 6 | 0 |
| Uncertain significance | 0 | 6 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
10 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | CXorf26 |
| HGNC | HGNC:28790 HGNC |
| Ensembl | ENSG00000102390 Ensembl |
| AllianceGenome | HGNC:28790 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000373358.8 | hg38 | chrX | 76,173,062 | 76,178,314 | 5,253 |
| ENST00000373357.3 | hg38 | chrX | 76,173,040 | 76,178,196 | 5,157 |
| ENST00000373357.3 | hg19 | chrX | 75,392,875 | 75,398,031 | 5,157 |
| ENST00000373358.8 | hg19 | chrX | 75,392,897 | 75,398,149 | 5,253 |
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