VPS29 VPS29 retromer complex component
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Uncertain significance | 0 | 10 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
10 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | DC15 |
| SYNONYM | DC7 |
| SYNONYM | PEP11 |
| MIM | 606932 OMIM |
| HGNC | HGNC:14340 HGNC |
| Ensembl | ENSG00000111237 Ensembl |
| AllianceGenome | HGNC:14340 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000549970.5 | hg38 | chr12 | 110,491,886 | 110,502,111 | 10,226 |
| ENST00000621131.4 | hg38 | chr12 | 110,491,526 | 110,501,503 | 9,978 |
| ENST00000549578.6 | hg38 | chr12 | 110,491,083 | 110,502,111 | 11,029 |
| ENST00000447578.6 | hg38 | chr12 | 110,491,625 | 110,502,078 | 10,454 |
| ENST00000552130.6 | hg38 | chr12 | 110,491,624 | 110,499,546 | 7,923 |
| ENST00000546588.1 | hg38 | chr12 | 110,491,691 | 110,502,092 | 10,402 |
| ENST00000360579.11 | hg38 | chr12 | 110,491,523 | 110,502,099 | 10,577 |
| ENST00000549578.6 | hg19 | chr12 | 110,928,888 | 110,939,916 | 11,029 |
| ENST00000360579.11 | hg19 | chr12 | 110,929,328 | 110,939,904 | 10,577 |
| ENST00000621131.4 | hg19 | chr12 | 110,929,331 | 110,939,308 | 9,978 |
| ENST00000552130.6 | hg19 | chr12 | 110,929,429 | 110,937,351 | 7,923 |
| ENST00000447578.6 | hg19 | chr12 | 110,929,430 | 110,939,883 | 10,454 |
| ENST00000546588.1 | hg19 | chr12 | 110,929,496 | 110,939,897 | 10,402 |
| ENST00000549970.5 | hg19 | chr12 | 110,929,691 | 110,939,916 | 10,226 |
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