PDPK1 3-phosphoinositide dependent protein kinase 1

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Information

Symbol: PDPK1
Type: protein-coding
Description: 3-phosphoinositide dependent protein kinase 1
Entrez Gene ID: 5170
Genome: hg19
Position: chr16:2,588,022-2,653,189
Genome: hg38
Position: chr16:2,538,021-2,603,188
MIM: 605213 OMIM
HGNC: HGNC:8816 HGNC
Ensembl: ENSG00000140992 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Likely benign	0	6
not provided	11	0
Uncertain significance	0	30

Ranking

	ClinVar
	0
	0
	0
	36
	0

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

Locus Zoom

Variants

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Target data	:	MGeND data only
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Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

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Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

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Target data	:	MGeND data only
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Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	PDK1
SYNONYM	PDPK2
SYNONYM	PDPK2P
SYNONYM	PRO0461
MIM	605213 OMIM
HGNC	HGNC:8816 HGNC
Ensembl	ENSG00000140992 Ensembl
AllianceGenome	HGNC:8816

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000268673.11	hg38	chr16	2,538,003	2,601,095	63,093
ENST00000389224.7	hg38	chr16	2,538,164	2,597,928	59,765
ENST00000342085.9	hg38	chr16	2,538,021	2,603,188	65,168
ENST00000441549.7	hg38	chr16	2,537,997	2,597,920	59,924
ENST00000441549.7	hg19	chr16	2,587,998	2,647,921	59,924
ENST00000268673.11	hg19	chr16	2,588,004	2,651,096	63,093
ENST00000342085.9	hg19	chr16	2,588,022	2,653,189	65,168
ENST00000389224.7	hg19	chr16	2,588,165	2,647,929	59,765

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