SLCO1C1 solute carrier organic anion transporter family member 1C1
Information
- Symbol
- SLCO1C1
- Type
- protein-coding
- Description
- solute carrier organic anion transporter family member 1C1
- Entrez Gene ID
- 53919
- Genome
- hg19
- Position
- chr12:20,848,414-20,905,547
- Genome
- hg38
- Position
- chr12:20,695,480-20,752,613
- MIM
- 613389 OMIM
- HGNC
- HGNC:13819 HGNC
- Ensembl
- ENSG00000139155 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 8 |
| Likely benign | 0 | 4 |
| not provided | 1 | 0 |
| Uncertain significance | 0 | 50 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
62 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | OATP-F |
| SYNONYM | OATP-RP5 |
| SYNONYM | OATP1 |
| SYNONYM | OATP14 |
| SYNONYM | OATP1C1 |
| SYNONYM | OATPF |
| SYNONYM | OATPRP5 |
| SYNONYM | SLC21A14 |
| MIM | 613389 OMIM |
| HGNC | HGNC:13819 HGNC |
| Ensembl | ENSG00000139155 Ensembl |
| AllianceGenome | HGNC:13819 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000545102.1 | hg38 | chr12 | 20,695,597 | 20,753,214 | 57,618 |
| ENST00000540354.5 | hg38 | chr12 | 20,695,462 | 20,752,817 | 57,356 |
| ENST00000266509.7 | hg38 | chr12 | 20,695,332 | 20,753,386 | 58,055 |
| ENST00000545604.5 | hg38 | chr12 | 20,695,480 | 20,752,613 | 57,134 |
| ENST00000266509.7 | hg19 | chr12 | 20,848,266 | 20,906,320 | 58,055 |
| ENST00000540354.5 | hg19 | chr12 | 20,848,396 | 20,905,751 | 57,356 |
| ENST00000545604.5 | hg19 | chr12 | 20,848,414 | 20,905,547 | 57,134 |
| ENST00000545102.1 | hg19 | chr12 | 20,848,531 | 20,906,148 | 57,618 |
Genome browser