LEPROT leptin receptor overlapping transcript
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 4 |
| Likely benign | 0 | 2 |
| Conflicting classifications of pathogenicity | 0 | 2 |
| not provided | 1 | 0 |
| Uncertain significance | 0 | 18 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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0 |
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24 |
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0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | LEPR |
| SYNONYM | OB-RGRP |
| SYNONYM | OBRGRP |
| SYNONYM | VPS55 |
| MIM | 613461 OMIM |
| HGNC | HGNC:29477 HGNC |
| Ensembl | ENSG00000213625 Ensembl |
| AllianceGenome | HGNC:29477 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000484243.1 | hg38 | chr1 | 65,420,710 | 65,430,303 | 9,594 |
| ENST00000613538.1 | hg38 | chr1 | 65,420,716 | 65,436,007 | 15,292 |
| ENST00000488747.5 | hg38 | chr1 | 65,420,708 | 65,431,920 | 11,213 |
| ENST00000371065.9 | hg38 | chr1 | 65,420,668 | 65,436,007 | 15,340 |
| ENST00000475108.5 | hg38 | chr1 | 65,420,587 | 65,432,064 | 11,478 |
| ENST00000475108.5 | hg19 | chr1 | 65,886,270 | 65,897,747 | 11,478 |
| ENST00000371065.9 | hg19 | chr1 | 65,886,351 | 65,901,690 | 15,340 |
| ENST00000488747.5 | hg19 | chr1 | 65,886,391 | 65,897,603 | 11,213 |
| ENST00000484243.1 | hg19 | chr1 | 65,886,393 | 65,895,986 | 9,594 |
| ENST00000613538.1 | hg19 | chr1 | 65,886,399 | 65,901,690 | 15,292 |
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