PPOX protoporphyrinogen oxidase
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 2 | 78 |
| Likely pathogenic | 0 | 34 |
| Benign | 10 | 22 |
| Likely benign | 0 | 78 |
| Conflicting classifications of pathogenicity | 0 | 26 |
| not provided | 0 | 2 |
| Uncertain significance | 0 | 244 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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44 |
![]() |
372 |
![]() |
26 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
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MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | PPO |
| SYNONYM | V290M |
| SYNONYM | VP |
| SYNONYM | VPCO |
| MIM | 600923 OMIM |
| HGNC | HGNC:9280 HGNC |
| Ensembl | ENSG00000143224 Ensembl |
| AllianceGenome | HGNC:9280 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000352210.9 | hg38 | chr1 | 161,166,410 | 161,171,218 | 4,809 |
| ENST00000544598.5 | hg38 | chr1 | 161,166,470 | 161,171,220 | 4,751 |
| ENST00000367999.9 | hg38 | chr1 | 161,166,426 | 161,171,220 | 4,795 |
| ENST00000535223.5 | hg38 | chr1 | 161,166,498 | 161,177,092 | 10,595 |
| ENST00000462866.5 | hg38 | chr1 | 161,166,840 | 161,171,218 | 4,379 |
| ENST00000352210.9 | hg19 | chr1 | 161,136,200 | 161,141,008 | 4,809 |
| ENST00000367999.9 | hg19 | chr1 | 161,136,216 | 161,141,010 | 4,795 |
| ENST00000462866.5 | hg19 | chr1 | 161,136,630 | 161,141,008 | 4,379 |
| ENST00000535223.5 | hg19 | chr1 | 161,136,288 | 161,146,882 | 10,595 |
| ENST00000544598.5 | hg19 | chr1 | 161,136,260 | 161,141,010 | 4,751 |
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