PNPLA2 patatin like phospholipase domain containing 2
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 3 | 46 |
| Likely pathogenic | 0 | 14 |
| Benign | 0 | 54 |
| Likely benign | 0 | 414 |
| Conflicting classifications of pathogenicity | 0 | 60 |
| Uncertain significance | 0 | 564 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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196 |
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860 |
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18 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
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MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | 1110001C14Rik |
| SYNONYM | ATGL |
| SYNONYM | FP17548 |
| SYNONYM | PEDF-R |
| SYNONYM | TTS-2.2 |
| SYNONYM | TTS2 |
| SYNONYM | iPLA2zeta |
| MIM | 609059 OMIM |
| HGNC | HGNC:30802 HGNC |
| Ensembl | ENSG00000177666 Ensembl |
| AllianceGenome | HGNC:30802 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000336615.9 | hg38 | chr11 | 818,914 | 825,573 | 6,660 |
| ENST00000336615.9 | hg19 | chr11 | 818,914 | 825,573 | 6,660 |
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