PTGS1 prostaglandin-endoperoxide synthase 1
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Likely pathogenic | 1 | 0 |
| Benign | 0 | 8 |
| Likely benign | 0 | 14 |
| Uncertain significance | 0 | 56 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
4 |
 |
74 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
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Variants
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | COX1 |
| SYNONYM | COX3 |
| SYNONYM | PCOX1 |
| SYNONYM | PES-1 |
| SYNONYM | PGG/HS |
| SYNONYM | PGHS-1 |
| SYNONYM | PGHS1 |
| SYNONYM | PHS1 |
| SYNONYM | PTGHS |
| MIM | 176805 OMIM |
| HGNC | HGNC:9604 HGNC |
| Ensembl | ENSG00000095303 Ensembl |
| AllianceGenome | HGNC:9604 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000540753.6 | hg38 | chr9 | 122,370,542 | 122,392,654 | 22,113 |
| ENST00000373698.7 | hg38 | chr9 | 122,375,322 | 122,392,788 | 17,467 |
| ENST00000223423.8 | hg38 | chr9 | 122,371,080 | 122,393,178 | 22,099 |
| ENST00000619306.5 | hg38 | chr9 | 122,371,039 | 122,392,608 | 21,570 |
| ENST00000362012.7 | hg38 | chr9 | 122,371,024 | 122,395,703 | 24,680 |
| ENST00000540753.6 | hg19 | chr9 | 125,132,821 | 125,154,933 | 22,113 |
| ENST00000362012.7 | hg19 | chr9 | 125,133,303 | 125,157,982 | 24,680 |
| ENST00000619306.5 | hg19 | chr9 | 125,133,318 | 125,154,887 | 21,570 |
| ENST00000223423.8 | hg19 | chr9 | 125,133,359 | 125,155,457 | 22,099 |
| ENST00000373698.7 | hg19 | chr9 | 125,137,601 | 125,155,067 | 17,467 |
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