CALCOCO1 calcium binding and coiled-coil domain 1

Information
Symbol
CALCOCO1
Type
protein-coding
Description
calcium binding and coiled-coil domain 1
Entrez Gene ID
57658
Genome
hg19
Position
chr12:54,102,301-54,121,236
Genome
hg38
Position
chr12:53,708,517-53,727,452
HGNC
HGNC:29306 HGNC
Ensembl
ENSG00000012822 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Likely benign 0 10
Uncertain significance 0 76
Ranking
ClinVar
0
0
0
86
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM Cocoa
SYNONYM PP13275
SYNONYM calphoglin
HGNC HGNC:29306 HGNC
Ensembl ENSG00000012822 Ensembl
AllianceGenome HGNC:29306
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000548263.5 hg38 chr12 53,711,159 53,727,428 16,270
ENST00000262059.8 hg38 chr12 53,708,517 53,727,745 19,229
ENST00000430117.6 hg38 chr12 53,711,119 53,727,439 16,321
ENST00000550804.6 hg38 chr12 53,708,517 53,727,452 18,936
ENST00000262059.8 hg19 chr12 54,102,301 54,121,529 19,229
ENST00000430117.6 hg19 chr12 54,104,903 54,121,223 16,321
ENST00000550804.6 hg19 chr12 54,102,301 54,121,236 18,936
ENST00000548263.5 hg19 chr12 54,104,943 54,121,212 16,270
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