HAMP hepcidin antimicrobial peptide

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Information
Clinical Significance
Ranking
Frequency
Disease area statistics
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Information

Symbol: HAMP
Type: protein-coding
Description: hepcidin antimicrobial peptide
Entrez Gene ID: 57817
Genome: hg19
Position: chr19:35,771,619-35,776,046
Genome: hg38
Position: chr19:35,280,716-35,285,143
MIM: 606464 OMIM
HGNC: HGNC:15598 HGNC
Ensembl: ENSG00000105697 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Pathogenic	1	10
Likely pathogenic	0	4
Benign	0	14
Likely benign	0	96
Conflicting classifications of pathogenicity	0	12
Uncertain significance	0	30

Ranking

	ClinVar
	0
	0
	14
	130
	8

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

Locus Zoom

Variants

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Target data	:	MGeND data only
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Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

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Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Search Word

Target data	:	MGeND data only
Category	:
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Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	HEPC
SYNONYM	HFE2B
SYNONYM	LEAP1
SYNONYM	PLTR
MIM	606464 OMIM
HGNC	HGNC:15598 HGNC
Ensembl	ENSG00000105697 Ensembl
AllianceGenome	HGNC:15598

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000222304.5	hg38	chr19	35,282,528	35,285,143	2,616
ENST00000598398.5	hg38	chr19	35,280,716	35,285,143	4,428
ENST00000598398.5	hg19	chr19	35,771,619	35,776,046	4,428
ENST00000222304.5	hg19	chr19	35,773,431	35,776,046	2,616

Key	Value
strand	+
start	35,773,248
Gene Symbol	HAMP
Entrez GeneId	57,817
Chr Band	19q13.1
end	35,776,044
chr	chr19

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