PTPRN protein tyrosine phosphatase receptor type N

Information
Symbol
PTPRN
Type
protein-coding
Description
protein tyrosine phosphatase receptor type N
Entrez Gene ID
5798
Genome
hg19
Position
chr2:220,154,345-220,174,123
Genome
hg38
Position
chr2:219,289,623-219,309,401
MIM
601773 OMIM
HGNC
HGNC:9676 HGNC
Ensembl
ENSG00000054356 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Benign 0 4
Likely benign 0 14
Uncertain significance 0 110
Ranking
ClinVar
0
0
0
128
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM IA-2
SYNONYM IA-2/PTP
SYNONYM IA2
SYNONYM ICA512
SYNONYM R-PTP-N
MIM 601773 OMIM
HGNC HGNC:9676 HGNC
Ensembl ENSG00000054356 Ensembl
AllianceGenome HGNC:9676
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000423636.6 hg38 chr2 219,289,841 219,308,984 19,144
ENST00000295718.7 hg38 chr2 219,289,623 219,309,401 19,779
ENST00000409251.7 hg38 chr2 219,289,623 219,309,498 19,876
ENST00000295718.7 hg19 chr2 220,154,345 220,174,123 19,779
ENST00000409251.7 hg19 chr2 220,154,345 220,174,220 19,876
ENST00000423636.6 hg19 chr2 220,154,563 220,173,706 19,144
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