ACTA1 actin alpha 1, skeletal muscle
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 15 | 236 |
| Likely pathogenic | 15 | 194 |
| Benign | 0 | 46 |
| Likely benign | 0 | 236 |
| Conflicting classifications of pathogenicity | 0 | 68 |
| no classification for the single variant | 0 | 4 |
| not provided | 0 | 2 |
| Uncertain significance | 0 | 302 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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170 |
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752 |
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26 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
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| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | ACTA |
| SYNONYM | ASMA |
| SYNONYM | CFTD |
| SYNONYM | CFTD1 |
| SYNONYM | CFTDM |
| SYNONYM | CMYP2A |
| SYNONYM | CMYP2B |
| SYNONYM | CMYP2C |
| SYNONYM | MPFD |
| SYNONYM | NEM1 |
| SYNONYM | NEM2 |
| SYNONYM | NEM3 |
| SYNONYM | SHPM |
| MIM | 102610 OMIM |
| HGNC | HGNC:129 HGNC |
| Ensembl | ENSG00000143632 Ensembl |
| AllianceGenome | HGNC:129 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000684723.1 | hg38 | chr1 | 229,430,365 | 229,434,100 | 3,736 |
| ENST00000366683.4 | hg38 | chr1 | 229,431,245 | 229,434,104 | 2,860 |
| ENST00000366684.7 | hg38 | chr1 | 229,431,245 | 229,434,094 | 2,850 |
| ENST00000684723.1 | hg19 | chr1 | 229,566,112 | 229,569,847 | 3,736 |
| ENST00000366684.7 | hg19 | chr1 | 229,566,992 | 229,569,841 | 2,850 |
| ENST00000366683.4 | hg19 | chr1 | 229,566,992 | 229,569,851 | 2,860 |
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