PTPRR protein tyrosine phosphatase receptor type R
Information
- Symbol
- PTPRR
- Type
- protein-coding
- Description
- protein tyrosine phosphatase receptor type R
- Entrez Gene ID
- 5801
- Genome
- hg19
- Position
- chr12:71,031,859-71,314,518
- Genome
- hg38
- Position
- chr12:70,638,079-70,920,738
- MIM
- 602853 OMIM
- HGNC
- HGNC:9680 HGNC
- Ensembl
- ENSG00000153233 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 2 |
| Likely benign | 0 | 4 |
| Uncertain significance | 0 | 72 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
78 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | EC-PTP |
| SYNONYM | PCPTP1 |
| SYNONYM | PTP-SL |
| SYNONYM | PTPBR7 |
| SYNONYM | PTPRQ |
| MIM | 602853 OMIM |
| HGNC | HGNC:9680 HGNC |
| Ensembl | ENSG00000153233 Ensembl |
| AllianceGenome | HGNC:9680 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000440835.6 | hg38 | chr12 | 70,638,073 | 70,754,661 | 116,589 |
| ENST00000283228.7 | hg38 | chr12 | 70,638,079 | 70,920,738 | 282,660 |
| ENST00000378778.5 | hg38 | chr12 | 70,638,074 | 70,754,759 | 116,686 |
| ENST00000549308.5 | hg38 | chr12 | 70,639,060 | 70,754,716 | 115,657 |
| ENST00000342084.8 | hg38 | chr12 | 70,638,931 | 70,788,982 | 150,052 |
| ENST00000440835.6 | hg19 | chr12 | 71,031,853 | 71,148,441 | 116,589 |
| ENST00000378778.5 | hg19 | chr12 | 71,031,854 | 71,148,539 | 116,686 |
| ENST00000283228.7 | hg19 | chr12 | 71,031,859 | 71,314,518 | 282,660 |
| ENST00000342084.8 | hg19 | chr12 | 71,032,711 | 71,182,762 | 150,052 |
| ENST00000549308.5 | hg19 | chr12 | 71,032,840 | 71,148,496 | 115,657 |
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