CTDSP1 CTD small phosphatase 1

Information
Symbol
CTDSP1
Type
protein-coding
Description
CTD small phosphatase 1
Entrez Gene ID
58190
Genome
hg19
Position
chr2:219,264,591-219,270,664
Genome
hg38
Position
chr2:218,399,868-218,405,941
MIM
605323 OMIM
HGNC
HGNC:21614 HGNC
Ensembl
ENSG00000144579 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Benign 0 4
Uncertain significance 0 32
Ranking
ClinVar
0
0
0
36
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM NIF3
SYNONYM NLI-IF
SYNONYM NLIIF
SYNONYM SCP1
MIM 605323 OMIM
HGNC HGNC:21614 HGNC
Ensembl ENSG00000144579 Ensembl
AllianceGenome HGNC:21614
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000710837.1 hg38 chr2 218,400,017 218,405,927 5,911
ENST00000710839.1 hg38 chr2 218,400,631 218,405,922 5,292
ENST00000464255.2 hg38 chr2 218,401,168 218,404,587 3,420
ENST00000710828.1 hg38 chr2 218,397,136 218,405,922 8,787
ENST00000443891.6 hg38 chr2 218,398,338 218,404,676 6,339
ENST00000428361.6 hg38 chr2 218,400,308 218,404,479 4,172
ENST00000488627.6 hg38 chr2 218,401,062 218,404,773 3,712
ENST00000452977.6 hg38 chr2 218,400,091 218,405,941 5,851
ENST00000273062.7 hg38 chr2 218,399,868 218,405,941 6,074
ENST00000273062.7 hg19 chr2 219,264,591 219,270,664 6,074
ENST00000428361.6 hg19 chr2 219,265,031 219,269,202 4,172
ENST00000443891.6 hg19 chr2 219,263,061 219,269,399 6,339
ENST00000452977.6 hg19 chr2 219,264,814 219,270,664 5,851
ENST00000464255.2 hg19 chr2 219,265,891 219,269,310 3,420
ENST00000488627.6 hg19 chr2 219,265,785 219,269,496 3,712
ENST00000710837.1 hg19 chr2 219,264,740 219,270,650 5,911
ENST00000710828.1 hg19 chr2 219,261,859 219,270,645 8,787
ENST00000710839.1 hg19 chr2 219,265,354 219,270,645 5,292
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